Turnaround time
10 workdays
48.4
40
DNA test for the URB1 variant c.5995del / haplotype LA2, an autosomal recessive semi-lethal cause of embryonic lethality and reduced litter size in Landrace pigs.
Overview
This DNA test analyses the URB1 variant c.5995del, linked to haplotype LA2, in pigs. The condition is described as embryonic lethality, embryonic death, spontaneous abortion, reduced litter size or URB1/LA2-related reproductive loss.
The variant has been described in Landrace pigs. URB1 is involved in ribosome biogenesis and cellular functions that are essential for growth and embryonic development. The test is especially relevant for breeding animals, because carriers can appear normal but can produce embryos with two variant copies when bred to another carrier.
In carrier-by-carrier matings, about one quarter of embryos can inherit two copies of the variant. For URB1/LA2, carrier-by-carrier matings showed an approximately 15.9% reduction in total number born compared with carrier-by-clear matings. This variant is described as semi-lethal: homozygous animals are strongly underrepresented and embryo survival is clearly reduced.
Because the loss usually occurs early in pregnancy, it does not necessarily appear as more stillborn or mummified piglets. The practical effect is mainly seen as smaller litters, repeat empty sows or fertility results that are difficult to explain without genetic information.
This trait is inherited as autosomal recessive. A clear animal has no copy of the tested variant. A carrier has one copy and can pass it on without being affected itself. A homozygous combination with two copies causes embryonic lethality or strongly reduced embryo survival.
The result labels for this test are N/N, N/del and del/del. The reported status shows whether the animal is clear, a carrier, or carries two copies of the tested variant.
This test is valuable for pig breeders because reproductive loss caused by recessive lethal alleles often remains hidden until two carriers are mated. Identifying carriers early makes breeding plans more precise without unnecessarily removing valuable lines from the population.
Included subanalyses
This analysis includes the following subanalysis:
Allele combinations & result interpretations
Below, for each tested locus, you will find the possible allele combinations that may be reported within this analysis, together with a brief explanation of their genetic meaning. The interpretation of possible interactions between different loci is included in the report, but is not shown here in full because that would lead to too many combinations on this page. The final expression may also depend on other genes and their interaction.
Genotype / allele combination: Clear (N/N)
The tested URB1 variant / haplotype LA2 was not detected. This animal will not pass on this variant and can be bred to a carrier for this variant without producing homozygous lethal embryos.
Genotype / allele combination: Carrier (N/del)
One copy of the tested URB1 variant / haplotype LA2 was detected. This animal is a carrier and can pass the variant to about half of its offspring. Do not breed this carrier to another carrier, to prevent homozygous lethal embryos and smaller litters.
Genotype / allele combination: Lethal genotype (del/del)
Two copies of the tested URB1 variant were detected. This genotype causes serious embryo-survival problems; homozygous animals are strongly underrepresented and carrier-by-carrier matings produce clearly smaller litters.
Sampling and submission guidelines







References